SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08354

Signal sequence   MRLYNSRILNPHQSIFILVLQCLITIVTS

Length  29

Organism  Caenorhabditis elegans

UniProt ID  O61460,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08354.cif

Structure  SPKB08354.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3387.10504

Aliphatic index  154.4827586

Isoelectric point  9.501216221

Charge (pH=7)   2.026061638

Topological polar surface area  1315.55

Aromaticity  0.068965517

Average rotatable bonds  3.827586207

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  45

X logP energy  -9.36156

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.