SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08316

Signal sequence   MDYLYSALTSKMNWIALLLAGLTFCCKVSVHS

Length  32

Organism  Danio rerio (Zebrafish) (Brachydanio rerio)

UniProt ID  O57460,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08316.cif

Structure  SPKB08316.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3580.29384

Aliphatic index  112.8125

Isoelectric point  8.223014898

Charge (pH=7)   0.963099546

Topological polar surface area  1304.16

Aromaticity  0.125

Average rotatable bonds  3.59375

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  50

X logP energy  -8.7133

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.