SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08309

Signal sequence   MDAARRGDTQPVMWTTRWLLLLPLLLCEGAQA

Length  32

Organism  Rattus norvegicus (Rat)

UniProt ID  O55162,

Motif  1..32



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08309.cif

Structure  SPKB08309.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3627.29834

Aliphatic index  106.875

Isoelectric point  6.379318058

Charge (pH=7)   -0.061332259

Topological polar surface area  1423.89

Aromaticity  0.0625

Average rotatable bonds  3.59375

Number of hydrogen bond donors  51

Number of hydrogen bond acceptors  47

X logP energy  -10.07799

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.