SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08276

Signal sequence   MAVPHPSSSSSRSHPFLSHVYHTSFHHHHHHNHPSLVLFWCLVFSLLSPLALS

Length  53

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  O49434,

Motif  1..53



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08276.cif

Structure  SPKB08276.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  6044.87584

Aliphatic index  84.52830189

Isoelectric point  8.599012257

Charge (pH=7)   1.935155858

Topological polar surface area  2252.05

Aromaticity  0.113207547

Average rotatable bonds  3.339622642

Number of hydrogen bond donors  80

Number of hydrogen bond acceptors  83

X logP energy  -20.45163

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.