SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08274

Signal sequence   MNNQNEDTEGGRNCCTCCLSFIFTAGLTSLFLWLSLRA

Length  38

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  O48915,

Motif  1..38



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08274.cif

Structure  SPKB08274.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4230.83064

Aliphatic index  77.10526316

Isoelectric point  4.426205659

Charge (pH=7)   -1.245924457

Topological polar surface area  1748.57

Aromaticity  0.105263158

Average rotatable bonds  3.631578947

Number of hydrogen bond donors  65

Number of hydrogen bond acceptors  61

X logP energy  -20.48496

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.