SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08273

Signal sequence   MSKALLHLHFLSLFLLCCVCHS

Length  22

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  O48849,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08273.cif

Structure  SPKB08273.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2516.13664

Aliphatic index  141.8181818

Isoelectric point  8.088458507

Charge (pH=7)   1.08449239

Topological polar surface area  847.17

Aromaticity  0.090909091

Average rotatable bonds  3.681818182

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  34

X logP energy  -3.3911

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.