SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08253

Signal sequence   MKQFFEFLITTFLLLGLAAA

Length  20

Organism  Caenorhabditis elegans

UniProt ID  O44516,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08253.cif

Structure  SPKB08253.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2274.78944

Aliphatic index  132

Isoelectric point  6.408795646

Charge (pH=7)   -0.000535612

Topological polar surface area  763.09

Aromaticity  0.2

Average rotatable bonds  3.7

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  27

X logP energy  -0.678

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.