SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08175

Signal sequence   MIQKPQMYVYIYLFVLIAAGPVDL

Length  24

Organism  Rattus norvegicus (Rat)

UniProt ID  O35312,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08175.cif

Structure  SPKB08175.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2786.42624

Aliphatic index  142.0833333

Isoelectric point  6.317627584

Charge (pH=7)   -0.004415493

Topological polar surface area  925.23

Aromaticity  0.166666667

Average rotatable bonds  3.583333333

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  34

X logP energy  0.2054

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.