SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08172

Signal sequence   MDMFPLTWIFLALYFSGHKVRS

Length  22

Organism  Rattus norvegicus (Rat)

UniProt ID  O35276,

Motif  1..22



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08172.cif

Structure  SPKB08172.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2660.18984

Aliphatic index  88.63636364

Isoelectric point  9.299751799

Charge (pH=7)   1.088191115

Topological polar surface area  916.24

Aromaticity  0.227272727

Average rotatable bonds  3.727272727

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  33

X logP energy  -2.31823

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.