SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08140

Signal sequence   MRVVTKLLYLVVLAICGLGIHGALTHTR

Length  28

Organism  Sambucus nigra (European elder)

UniProt ID  O22415,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08140.cif

Structure  SPKB08140.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3048.78814

Aliphatic index  160

Isoelectric point  10.45701669

Charge (pH=7)   3.116675695

Topological polar surface area  1137.12

Aromaticity  0.035714286

Average rotatable bonds  3.571428571

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  40

X logP energy  -6.22456

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.