SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08117

Signal sequence   MSNISWYRHCSVRLQLVTLALFLLLGSASLGSA

Length  33

Organism  Caenorhabditis elegans

UniProt ID  O17798,

Motif  1..33



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08117.cif

Structure  SPKB08117.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3608.27734

Aliphatic index  133.030303

Isoelectric point  9.501216221

Charge (pH=7)   2.026061638

Topological polar surface area  1410.81

Aromaticity  0.090909091

Average rotatable bonds  3.545454545

Number of hydrogen bond donors  53

Number of hydrogen bond acceptors  49

X logP energy  -12.47296

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.