SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08057

Signal sequence   MRVEGIQRNWKQWWIWGILGFWMVMIYNVRG

Length  31

Organism  Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025) (HIV-1)

UniProt ID  O12164,

Motif  1..31



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Virion

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08057.cif

Structure  SPKB08057.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3954.73514

Aliphatic index  90.96774194

Isoelectric point  11.43078747

Charge (pH=7)   2.99860404

Topological polar surface area  1456.88

Aromaticity  0.225806452

Average rotatable bonds  4.064516129

Number of hydrogen bond donors  53

Number of hydrogen bond acceptors  45

X logP energy  -3.19789

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.