SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB08028

Signal sequence   MDCHLSILILFGCCVLSCSR

Length  20

Organism  Rattus norvegicus (Rat)

UniProt ID  O08680,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB08028.cif

Structure  SPKB08028.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2213.73234

Aliphatic index  131.5

Isoelectric point  7.122852947

Charge (pH=7)   -0.158562301

Topological polar surface area  804.79

Aromaticity  0.05

Average rotatable bonds  3.6

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  32

X logP energy  -6.43083

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.