SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07873

Signal sequence   MNDSVRTTTTISSTKSLVHSFQLSAILHLFLLISFTPMSAAA

Length  42

Organism  Caenorhabditis elegans

UniProt ID  G5EEL5,

Motif  1..42



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07873.cif

Structure  SPKB07873.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4539.28504

Aliphatic index  106.9047619

Isoelectric point  9.699005007

Charge (pH=7)   1.17995062

Topological polar surface area  1799.61

Aromaticity  0.071428571

Average rotatable bonds  3.5

Number of hydrogen bond donors  65

Number of hydrogen bond acceptors  66

X logP energy  -20.01523

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.