SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07803

Signal sequence   MHSKDMDFVQMFVCFLLCWTGVDA

Length  24

Organism  Danio rerio (Zebrafish) (Brachydanio rerio)

UniProt ID  F8W3X3,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07803.cif

Structure  SPKB07803.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2824.35594

Aliphatic index  72.91666667

Isoelectric point  4.308153298

Charge (pH=7)   -2.034011623

Topological polar surface area  998.56

Aromaticity  0.166666667

Average rotatable bonds  3.75

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  38

X logP energy  -5.0113

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.