SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07797

Signal sequence   MSDKTKTNEGFSRRSFIGSAAVVTAGVAGLGAIDAASA

Length  38

Organism  Pseudomonas putida (strain DSM 28022 / S16)

UniProt ID  F8G0P2,

Motif  1..38



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  5TTJ,

Predicted Structure ID  SPKB07797.cif

Structure  SPKB07797.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3715.15294

Aliphatic index  74.73684211

Isoelectric point  9.532416112

Charge (pH=7)   1.0000557

Topological polar surface area  1632.69

Aromaticity  0.052631579

Average rotatable bonds  3.263157895

Number of hydrogen bond donors  59

Number of hydrogen bond acceptors  56

X logP energy  -23.42506

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.