SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07789

Signal sequence   MSKEKSYVIALLLSLLLCLSFQVGVSEA

Length  28

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  F4KCH3,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07789.cif

Structure  SPKB07789.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3042.68264

Aliphatic index  149.6428571

Isoelectric point  6.35149893

Charge (pH=7)   -0.061880653

Topological polar surface area  1140.13

Aromaticity  0.071428571

Average rotatable bonds  3.714285714

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  42

X logP energy  -7.4156

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.