SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07784

Signal sequence   MDMLRSACFYFLLIVFVILSWSLLCDS

Length  27

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  F4JBX1,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07784.cif

Structure  SPKB07784.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3186.89374

Aliphatic index  140.7407407

Isoelectric point  4.109196137

Charge (pH=7)   -1.12592589

Topological polar surface area  1073.36

Aromaticity  0.185185185

Average rotatable bonds  3.740740741

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  40

X logP energy  -2.34813

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.