SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07712

Signal sequence   MFSLPALLIGACAFAAAAVA

Length  20

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  D7UPN3,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07712.cif

Structure  SPKB07712.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1908.34724

Aliphatic index  132.5

Isoelectric point  5.922539791

Charge (pH=7)   -0.063990417

Topological polar surface area  627.66

Aromaticity  0.1

Average rotatable bonds  2.8

Number of hydrogen bond donors  22

Number of hydrogen bond acceptors  24

X logP energy  -3.0927

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.