SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07696

Signal sequence   MDFLLLGLCLHWLLRRPSGVVLCLLGACFQMLPA

Length  34

Organism  Rattus norvegicus (Rat)

UniProt ID  D4A6D8,

Motif  1..34



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07696.cif

Structure  SPKB07696.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3800.76214

Aliphatic index  149.1176471

Isoelectric point  8.062146899

Charge (pH=7)   0.903409104

Topological polar surface area  1274.93

Aromaticity  0.088235294

Average rotatable bonds  3.529411765

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  46

X logP energy  -3.10796

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.