SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07644

Signal sequence   MDSPCWLLLLLLGAFAIIGCVQA

Length  23

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  C0LGW2,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07644.cif

Structure  SPKB07644.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2448.03744

Aliphatic index  161.3043478

Isoelectric point  3.749955547

Charge (pH=7)   -1.125518648

Topological polar surface area  811.14

Aromaticity  0.086956522

Average rotatable bonds  3.304347826

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  30

X logP energy  -1.7707

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.