SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07636

Signal sequence   MTRDDKFPIVYSLLLIVLLFVSPIYG

Length  26

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  C0LGR9,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07636.cif

Structure  SPKB07636.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3013.67164

Aliphatic index  153.4615385

Isoelectric point  6.435263944

Charge (pH=7)   -0.003121906

Topological polar surface area  1036.91

Aromaticity  0.153846154

Average rotatable bonds  3.615384615

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  37

X logP energy  -1.65893

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.