SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07630

Signal sequence   MEFITQNQAITSLSMINTDIDQPKASLRSRFLLHLIICLLFFVPPCSS

Length  48

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  C0LGP9,

Motif  1..48



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07630.cif

Structure  SPKB07630.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5454.46404

Aliphatic index  115.8333333

Isoelectric point  7.25521914

Charge (pH=7)   -0.032689607

Topological polar surface area  2092.57

Aromaticity  0.083333333

Average rotatable bonds  3.708333333

Number of hydrogen bond donors  73

Number of hydrogen bond acceptors  74

X logP energy  -17.58676

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.