SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07620

Signal sequence   MERERSNFFFLFLFCSWVSMA

Length  21

Organism  Arabidopsis thaliana (Mouse-ear cress)

UniProt ID  C0LGF5,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07620.cif

Structure  SPKB07620.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2648.11004

Aliphatic index  55.71428571

Isoelectric point  6.355737035

Charge (pH=7)   -0.060446794

Topological polar surface area  963.29

Aromaticity  0.285714286

Average rotatable bonds  4

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  33

X logP energy  -4.65566

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.