SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07612

Signal sequence   MSESSTFTTAVVPEGEGVAPM

Length  21

Organism  Cyclocybe aegerita (Black poplar mushroom) (Agrocybe aegerita)

UniProt ID  C0HLG3,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Vacuole

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07612.cif

Structure  SPKB07612.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2127.36604

Aliphatic index  50.95238095

Isoelectric point  3.472799833

Charge (pH=7)   -2.996690332

Topological polar surface area  861.02

Aromaticity  0.047619048

Average rotatable bonds  3.095238095

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  33

X logP energy  -11.1601

Hydropathy 



Literature Information


Title  Gene Organization, Expression, and Localization of Ribotoxin-Like Protein Ageritin in Fruiting Body and Mycelium of Agrocybe aegerita.

DOI  10.3390/ijms21197158,

Publication Year  2020

PubMed ID  32998313,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.