SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07542

Signal sequence   MEKSSNRRFGVRTVAAIVAGLMVGGMCTAMTASA

Length  34

Organism  Bifidobacterium bifidum (strain DSM 20082 / JCM 1254 / BCRC 11844 / KCTC 3440 / E319f (Variant a))

UniProt ID  B3TLD6,

Motif  1..34



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07542.cif

Structure  SPKB07542.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3475.13644

Aliphatic index  74.70588235

Isoelectric point  11.37963928

Charge (pH=7)   2.937479738

Topological polar surface area  1437.11

Aromaticity  0.029411765

Average rotatable bonds  3.441176471

Number of hydrogen bond donors  54

Number of hydrogen bond acceptors  52

X logP energy  -18.27889

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.