SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07521

Signal sequence   MRKPADEHHFTMETSGMHLVGFWLHVLLLFQLSGLGDS

Length  38

Organism  Danio rerio (Zebrafish) (Brachydanio rerio)

UniProt ID  B3DIG4,

Motif  1..38



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07521.cif

Structure  SPKB07521.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4339.02984

Aliphatic index  89.73684211

Isoelectric point  6.502663261

Charge (pH=7)   -1.634234468

Topological polar surface area  1643.1

Aromaticity  0.105263158

Average rotatable bonds  3.710526316

Number of hydrogen bond donors  57

Number of hydrogen bond acceptors  58

X logP energy  -11.32783

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.