SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07281

Signal sequence   MIKKVPIVLSIFCFLLLLSSSHG

Length  23

Organism  Catharanthus roseus (Madagascar periwinkle) (Vinca rosea)

UniProt ID  A0A2S1XB67,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  Vacuole

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07281.cif

Structure  SPKB07281.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2546.21094

Aliphatic index  160.8695652

Isoelectric point  9.677346754

Charge (pH=7)   2.026328607

Topological polar surface area  856.37

Aromaticity  0.086956522

Average rotatable bonds  3.652173913

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  33

X logP energy  -2.7564

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.