SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07238

Signal sequence   MEASTSLLVLVLAAAAFA

Length  18

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  A0A0P0XII1,

Motif  1..18



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07238.cif

Structure  SPKB07238.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1778.13704

Aliphatic index  152.2222222

Isoelectric point  3.849983241

Charge (pH=7)   -1.000240578

Topological polar surface area  656.01

Aromaticity  0.055555556

Average rotatable bonds  3.111111111

Number of hydrogen bond donors  23

Number of hydrogen bond acceptors  24

X logP energy  -4.5183

Hydropathy 



Literature Information


Title  NA

DOI  NA,

Publication Year  0

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.