SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07189

Signal sequence   MDTTTAKQASTKFVVLGLLLGILMSAMDNTIVATA

Length  35

Organism  Bacillus subtilis 1A751

UniProt ID  NA,

Motif  1..35



Activity Information


Pathway  Sec

Natural/Artificial  Artificial

Subcellular location  Extracellular environment

Secretion efficiency  alpha-amylase yield: 15.5(U/mL)

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07189.cif

Structure  SPKB07189.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3627.32794

Aliphatic index  117.1428571

Isoelectric point  6.447300033

Charge (pH=7)   -0.0017128

Topological polar surface area  1427.38

Aromaticity  0.028571429

Average rotatable bonds  3.485714286

Number of hydrogen bond donors  50

Number of hydrogen bond acceptors  53

X logP energy  -14.3458

Hydropathy 



Literature Information


Title  Optimization of thermostable alpha-amylase secretion by screening of optimal singal peptides in Bacillus subtilis

DOI  NA,

Publication Year  2017

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.