SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07185

Signal sequence   MRKKTKNRLISSVLSTVVISSLLFPGAAGA

Length  30

Organism  Bacillus subtilis 1A751

UniProt ID  NA,

Motif  1..30



Activity Information


Pathway  Sec

Natural/Artificial  Artificial

Subcellular location  Extracellular environment

Secretion efficiency  alpha-amylase yield: 59.7(U/mL)

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07185.cif

Structure  SPKB07185.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3145.79784

Aliphatic index  117

Isoelectric point  12.54607567

Charge (pH=7)   4.997092575

Topological polar surface area  1284.99

Aromaticity  0.033333333

Average rotatable bonds  3.566666667

Number of hydrogen bond donors  47

Number of hydrogen bond acceptors  45

X logP energy  -13.96136

Hydropathy 



Literature Information


Title  Optimization of thermostable alpha-amylase secretion by screening of optimal singal peptides in Bacillus subtilis

DOI  NA,

Publication Year  2017

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.