SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07168

Signal sequence   MKSCKQLIVCSLAAILLLIPSVSFA

Length  25

Organism  Bacillus subtilis 1A751

UniProt ID  Q02113,

Motif  1..25



Activity Information


Pathway  Sec

Natural/Artificial  Artificial

Subcellular location  Extracellular environment

Secretion efficiency  alpha-amylase yield: 593(U/mL)

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07168.cif

Structure  SPKB07168.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2649.34724

Aliphatic index  160

Isoelectric point  8.821677593

Charge (pH=7)   1.8734448

Topological polar surface area  928.98

Aromaticity  0.04

Average rotatable bonds  3.52

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  36

X logP energy  -5.3717

Hydropathy 



Literature Information


Title  Optimization of thermostable alpha-amylase secretion by screening of optimal singal peptides in Bacillus subtilis

DOI  NA,

Publication Year  2017

PubMed ID  NA,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.