SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB07131

Signal sequence   MRKKITLACKTCGNRNYTTMKSSASA

Length  26

Organism  Bacillus subtilis RIK1285

UniProt ID  NA,

Motif  1..26



Activity Information


Pathway  Sec

Natural/Artificial  Artificial

Subcellular location  Extracellular environment

Secretion efficiency  alpha-amylase yield: 329.9(U/mL)

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB07131.cif

Structure  SPKB07131.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2865.39514

Aliphatic index  41.53846154

Isoelectric point  10.85245089

Charge (pH=7)   5.871997695

Topological polar surface area  1266.72

Aromaticity  0.038461538

Average rotatable bonds  3.846153846

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  47

X logP energy  -18.09086

Hydropathy 



Literature Information


Title  Enhanced extracellular expression of Bacillus stearothermophilus alpha-amylase in Bacillus subtilis through signal peptide optimization, chaperone overexpression and alpha-amylase mutant selection

DOI  10.1186/s12934-019-1119-8,

Publication Year  2019

PubMed ID  30971250,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.