SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06710

Signal sequence   MPQLSRRQFLQTTAVTAGLATFLGTPARA

Length  29

Organism  Corynebacterium glutamicum

UniProt ID  NA,

Motif  1..29



Activity Information


Pathway  Tat

Natural/Artificial  Artificial

Subcellular location  Periplasmic space

Secretion efficiency  alpha-amylase yield: 4.58794(mU/ml)

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06710.cif

Structure  SPKB06710.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3104.62074

Aliphatic index  81.03448276

Isoelectric point  12.801071

Charge (pH=7)   2.997974365

Topological polar surface area  1296.89

Aromaticity  0.068965517

Average rotatable bonds  3.379310345

Number of hydrogen bond donors  46

Number of hydrogen bond acceptors  43

X logP energy  -15.09109

Hydropathy 



Literature Information


Title  Scanning the Corynebacterium glutamicum R genome for high-efficiency secretion signal sequences

DOI  10.1099/mic.0.024075-0,

Publication Year  2009

PubMed ID  19246745,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.