SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06708

Signal sequence   MTSSFSRRQFLLGGLVLAGTGAVAACTSDPGPAAS

Length  35

Organism  Corynebacterium glutamicum

UniProt ID  NA,

Motif  1..35



Activity Information


Pathway  Tat

Natural/Artificial  Artificial

Subcellular location  Periplasmic space

Secretion efficiency  alpha-amylase yield: 10.1954(mU/ml)

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06708.cif

Structure  SPKB06708.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3397.86894

Aliphatic index  78.28571429

Isoelectric point  8.54983383

Charge (pH=7)   0.936449445

Topological polar surface area  1401.17

Aromaticity  0.057142857

Average rotatable bonds  3.028571429

Number of hydrogen bond donors  51

Number of hydrogen bond acceptors  50

X logP energy  -19.79436

Hydropathy 



Literature Information


Title  Scanning the Corynebacterium glutamicum R genome for high-efficiency secretion signal sequences

DOI  10.1099/mic.0.024075-0,

Publication Year  2009

PubMed ID  19246745,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.