SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06701

Signal sequence   MEKKSFPIARVIGIGVLGIAGMGILLLWLAVTLSDPASPGA

Length  41

Organism  Corynebacterium glutamicum

UniProt ID  NA,

Motif  1..41



Activity Information


Pathway  Sec

Natural/Artificial  Artificial

Subcellular location  Extracellular environment

Secretion efficiency  alpha-amylase yield: 17.5871(mU/ml)

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06701.cif

Structure  SPKB06701.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4164.07644

Aliphatic index  138.0487805

Isoelectric point  9.534845266

Charge (pH=7)   0.999612527

Topological polar surface area  1486.2

Aromaticity  0.048780488

Average rotatable bonds  3.268292683

Number of hydrogen bond donors  51

Number of hydrogen bond acceptors  53

X logP energy  -8.63673

Hydropathy 



Literature Information


Title  Scanning the Corynebacterium glutamicum R genome for high-efficiency secretion signal sequences

DOI  10.1099/mic.0.024075-0,

Publication Year  2009

PubMed ID  19246745,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.