SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06698

Signal sequence   MRSFHTAAVAGLTAIALSVGSATVATA

Length  27

Organism  Corynebacterium glutamicum

UniProt ID  NA,

Motif  1..27



Activity Information


Pathway  Sec

Natural/Artificial  Artificial

Subcellular location  Extracellular environment

Secretion efficiency  alpha-amylase yield: 41.0365(mU/ml)

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06698.cif

Structure  SPKB06698.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2574.97824

Aliphatic index  105.1851852

Isoelectric point  10.5517587

Charge (pH=7)   1.088890079

Topological polar surface area  1052.11

Aromaticity  0.037037037

Average rotatable bonds  2.962962963

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  38

X logP energy  -13.74363

Hydropathy 



Literature Information


Title  Scanning the Corynebacterium glutamicum R genome for high-efficiency secretion signal sequences

DOI  10.1099/mic.0.024075-0,

Publication Year  2009

PubMed ID  19246745,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.