SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06697

Signal sequence   MVNTLNSKTVNVPRFARGVVAAATALFFGALVSLAPSALA

Length  40

Organism  Corynebacterium glutamicum

UniProt ID  NA,

Motif  1..40



Activity Information


Pathway  Tat

Natural/Artificial  Artificial

Subcellular location  Periplasmic space

Secretion efficiency  alpha-amylase yield: 42.5658(mU/ml)

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06697.cif

Structure  SPKB06697.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4046.78704

Aliphatic index  114.75

Isoelectric point  12.51647815

Charge (pH=7)   2.997682643

Topological polar surface area  1581.11

Aromaticity  0.075

Average rotatable bonds  3.15

Number of hydrogen bond donors  55

Number of hydrogen bond acceptors  54

X logP energy  -16.19146

Hydropathy 



Literature Information


Title  Scanning the Corynebacterium glutamicum R genome for high-efficiency secretion signal sequences

DOI  10.1099/mic.0.024075-0,

Publication Year  2009

PubMed ID  19246745,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.