SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06680

Signal sequence   MQINRRGFLKATAGLATIGAASMFMPKANA

Length  30

Organism  Corynebacterium glutamicum

UniProt ID  NA,

Motif  1..30



Activity Information


Pathway  Tat

Natural/Artificial  Artificial

Subcellular location  Periplasmic space

Secretion efficiency  alpha-amylase yield: 288.275(mU/ml)

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06680.cif

Structure  SPKB06680.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3138.75774

Aliphatic index  75.33333333

Isoelectric point  12.53174703

Charge (pH=7)   3.997387609

Topological polar surface area  1264.23

Aromaticity  0.066666667

Average rotatable bonds  3.5

Number of hydrogen bond donors  44

Number of hydrogen bond acceptors  44

X logP energy  -13.51896

Hydropathy 



Literature Information


Title  Scanning the Corynebacterium glutamicum R genome for high-efficiency secretion signal sequences

DOI  10.1099/mic.0.024075-0,

Publication Year  2009

PubMed ID  19246745,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.