SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06659

Signal sequence   MMVLLQVIAAGATVSLGADMTAQA

Length  24

Organism  Lactobacillus plantarum WCFS1

UniProt ID  NA,

Motif  1..24



Activity Information


Pathway  Sec

Natural/Artificial  Artificial

Subcellular location  Extracellular environment

Secretion efficiency  Nuclease yield: 0.09(U/ml)

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06659.cif

Structure  SPKB06659.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2362.84344

Aliphatic index  126.25

Isoelectric point  3.749987361

Charge (pH=7)   -1.001569216

Topological polar surface area  916.79

Aromaticity  0

Average rotatable bonds  3.25

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  34

X logP energy  -8.8978

Hydropathy 



Literature Information


Title  Genome-wide analysis of signal peptide functionality in Lactobacillus plantarum WCFS1

DOI  10.1186/1471-2164-10-425,

Publication Year  2009

PubMed ID  19744343,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.