SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06635

Signal sequence   MRNRLNRLGLESKSHYKLYKSGRRWVAASITVFSVGIGLTFSQVEQVKA

Length  49

Organism  Lactobacillus plantarum WCFS1

UniProt ID  NA,

Motif  1..49



Activity Information


Pathway  Sec

Natural/Artificial  Artificial

Subcellular location  Extracellular environment

Secretion efficiency  Nuclease yield: 1.28(U/ml)

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06635.cif

Structure  SPKB06635.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5583.50344

Aliphatic index  91.42857143

Isoelectric point  11.62129458

Charge (pH=7)   7.089546115

Topological polar surface area  2367.43

Aromaticity  0.102040816

Average rotatable bonds  3.897959184

Number of hydrogen bond donors  87

Number of hydrogen bond acceptors  77

X logP energy  -23.75925

Hydropathy 



Literature Information


Title  Genome-wide analysis of signal peptide functionality in Lactobacillus plantarum WCFS1

DOI  10.1186/1471-2164-10-425,

Publication Year  2009

PubMed ID  19744343,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.