SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06601

Signal sequence   MKKFNFKTMLLLVLASCVFGVVVNVTTSLGPQTAITAQA

Length  39

Organism  Lactobacillus plantarum WCFS1

UniProt ID  NA,

Motif  1..39



Activity Information


Pathway  Sec

Natural/Artificial  Artificial

Subcellular location  Extracellular environment

Secretion efficiency  Nuclease yield: 35.84(U/ml)

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06601.cif

Structure  SPKB06601.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4143.02994

Aliphatic index  114.8717949

Isoelectric point  10.51301932

Charge (pH=7)   2.935124482

Topological polar surface area  1552.36

Aromaticity  0.076923077

Average rotatable bonds  3.487179487

Number of hydrogen bond donors  54

Number of hydrogen bond acceptors  57

X logP energy  -13.3966

Hydropathy 



Literature Information


Title  Genome-wide analysis of signal peptide functionality in Lactobacillus plantarum WCFS1

DOI  10.1186/1471-2164-10-425,

Publication Year  2009

PubMed ID  19744343,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.