SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06478

Signal sequence   MKWMCSICCAAVLLAGGAAQA

Length  21

Organism  Bacillus subtilis TEB1030

UniProt ID  NA,

Motif  1..21



Activity Information


Pathway  Sec

Natural/Artificial  Artificial

Subcellular location  Extracellular environment

Secretion efficiency  Cutinase yield: 0.49(U/ml)

Type  Sec/SPI



Structure Information


PDB ID  1W17,

Predicted Structure ID  SPKB06478.cif

Structure  SPKB06478.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2098.60044

Aliphatic index  98.0952381

Isoelectric point  8.045790785

Charge (pH=7)   0.811765118

Topological polar surface area  750.45

Aromaticity  0.047619048

Average rotatable bonds  3.19047619

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  30

X logP energy  -6.3228

Hydropathy 



Literature Information


Title  Systematic screening of all signal peptides from Bacillus subtilis: A powerful strategy in optimizing heterologous protein secretion in gram-positive bacteria

DOI  10.1016/j.jmb.2006.07.034,

Publication Year  2006

PubMed ID  16930615,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.