SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06358

Signal sequence   MLRISGRNMKVLFAAALIVGSVVFLLLPGPSVA

Length  33

Organism  Homo sapiens (Human)

UniProt ID  NA,

Motif  1..33



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06358.cif

Structure  SPKB06358.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3441.28364

Aliphatic index  150.6060606

Isoelectric point  12.51647815

Charge (pH=7)   2.997682643

Topological polar surface area  1230.54

Aromaticity  0.060606061

Average rotatable bonds  3.363636364

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  43

X logP energy  -6.95366

Hydropathy 



Literature Information


Title  Protein-Specific Signal Peptides for Mammalian Vector Engineering

DOI  10.1021/acssynbio.3c00157,

Publication Year  2023

PubMed ID  37487508,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.