SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06319

Signal sequence   MKKLLFAIPLVVPFYAMAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSL

Length  70

Organism  Escherichia coli

UniProt ID  NA,

Motif  1..70



Activity Information


Pathway  NA

Natural/Artificial  Artificial

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  1A22,

Predicted Structure ID  SPKB06319.cif

Structure  SPKB06319.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  8279.71374

Aliphatic index  90.71428571

Isoelectric point  8.945758565

Charge (pH=7)   1.183204214

Topological polar surface area  3093.35

Aromaticity  0.157142857

Average rotatable bonds  3.785714286

Number of hydrogen bond donors  103

Number of hydrogen bond acceptors  106

X logP energy  -17.46769

Hydropathy 



Literature Information


Title  In silico and in vitro analysis of a rational mutation in gIII signal peptide and its effects on periplasmic expression of rhGH in E. coli

DOI  10.1007/s00203-022-03193-1,

Publication Year  2022

PubMed ID  36001178,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.