SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06318

Signal sequence   MKKLLFAIPLVVPFYSHSFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSL

Length  70

Organism  Escherichia coli

UniProt ID  NA,

Motif  1..70



Activity Information


Pathway  NA

Natural/Artificial  Artificial

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  1A22,

Predicted Structure ID  SPKB06318.cif

Structure  SPKB06318.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  8317.66104

Aliphatic index  87.85714286

Isoelectric point  8.948707904

Charge (pH=7)   1.274113305

Topological polar surface area  3162.49

Aromaticity  0.157142857

Average rotatable bonds  3.8

Number of hydrogen bond donors  106

Number of hydrogen bond acceptors  108

X logP energy  -20.31019

Hydropathy 



Literature Information


Title  In silico and in vitro analysis of a rational mutation in gIII signal peptide and its effects on periplasmic expression of rhGH in E. coli

DOI  10.1007/s00203-022-03193-1,

Publication Year  2022

PubMed ID  36001178,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.