SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06296

Signal sequence   MVKSRNRILHYILVAVSVVIVVLGFSVIKASA

Length  32

Organism  Pediococcus acidilactici

UniProt ID  NA,

Motif  1..32



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06296.cif

Structure  SPKB06296.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3483.30624

Aliphatic index  167.1875

Isoelectric point  11.67668797

Charge (pH=7)   4.087446286

Topological polar surface area  1314.18

Aromaticity  0.0625

Average rotatable bonds  3.625

Number of hydrogen bond donors  48

Number of hydrogen bond acceptors  45

X logP energy  -7.77206

Hydropathy 



Literature Information


Title  Genome-wide high-throughput signal peptide screening via plasmid pUC256E improves protease secretion in Lactiplantibacillus plantarum and Pediococcus acidilactici

DOI  10.1186/s12864-022-08292-3,

Publication Year  2022

PubMed ID  35021997,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.