SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06275

Signal sequence   METDTLLLWVLLLWVPGSTGD

Length  21

Organism  Mus musculus (Mouse)

UniProt ID  NA,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Artificial

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  4KUC,

Predicted Structure ID  SPKB06275.cif

Structure  SPKB06275.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2359.76254

Aliphatic index  139.047619

Isoelectric point  3.380030198

Charge (pH=7)   -2.99934761

Topological polar surface area  860.93

Aromaticity  0.095238095

Average rotatable bonds  3.428571429

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  30

X logP energy  -3.3981

Hydropathy 



Literature Information


Title  Evaluation of artificial signal peptides for secretion of two lysosomal enzymes in CHO cells

DOI  10.1042/BCJ20210015,

Publication Year  2021

PubMed ID  34032266,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.