SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB06237

Signal sequence   MQRVNMIMAESPGAATACAAGYAASAEC

Length  28

Organism  Homo sapiens (Human)

UniProt ID  NA,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB06237.cif

Structure  SPKB06237.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2776.18284

Aliphatic index  56.42857143

Isoelectric point  4.25806771

Charge (pH=7)   -1.123268612

Topological polar surface area  1143.83

Aromaticity  0.035714286

Average rotatable bonds  3.142857143

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  43

X logP energy  -15.29553

Hydropathy 



Literature Information


Title  Characterization of missense mutations in the signal peptide and propeptide of FIX in hemophilia B by a cell-based assay

DOI  10.1182/bloodadvances.2020002520,

Publication Year  2020

PubMed ID  32766856,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.