Peptide-Information

General Information

SPKB ID SPKB06223

Signal sequence MGNKRNLGFVIFFWALVVAVVA

Length 22

Organism Arabidopsis thaliana (Mouse-ear cress)

UniProt ID NA,

Motif 1..22

Activity Information

Pathway SRP-dependent

Natural/Artificial Natural

Subcellular location ER

Secretion efficiency NA

Type Sec/SPI

Structure Information

PDB ID NA,

Predicted Structure ID SPKB06223.cif

Structure SPKB06223.cif

Very high (pLDDT > 90)

Confident (90 > pLDDT > 70)

Low (70 > pLDDT > 50)

Very low (pLDDT < 50)

Loading PAE…

Expected Position Error (Ångströms)

Physicochemical Information

Molecular weight 2452.00144

Aliphatic index 132.7272727

Isoelectric point 11.65177567

Charge (pH=7) 1.997685954

Topological polar surface area 864.31

Aromaticity 0.181818182

Average rotatable bonds 3.5

Number of hydrogen bond donors 30

Number of hydrogen bond acceptors 28

X logP energy -2.33183

Hydropathy

Literature Information

Title Yeast-based reporter assay system for identifying the requirements of intramembrane proteolysis by signal peptide peptidase of Arabidopsis thaliana

DOI 10.1002/2211-5463.12936,

Publication Year 2020

PubMed ID 32686366,

Patent ID NA,